Redundancy in information transmission in a two-step cascade

Ayan Biswas and Suman K. Banik
Phys. Rev. E 93, 052422 – Published 31 May 2016

Abstract

We present a stochastic framework to study signal transmission in a generic two-step cascade SXY. Starting from a set of Langevin equations obeying Gaussian noise processes we calculate the variance and covariance while considering both linear and nonlinear production terms for different biochemical species of the cascade. These quantities are then used to calculate the net synergy within the purview of partial information decomposition. We show that redundancy in information transmission is essentially an important consequence of Markovian property of the two-step cascade motif. We also show that redundancy increases fidelity of the signaling pathway.

  • Figure
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  • Received 12 January 2016
  • Revised 6 April 2016

DOI:https://doi.org/10.1103/PhysRevE.93.052422

©2016 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living Systems

Authors & Affiliations

Ayan Biswas* and Suman K. Banik

  • Department of Chemistry, Bose Institute, 93/1 A P C Road, Kolkata 700009, India

  • *ayanbiswas@jcbose.ac.in
  • skbanik@jcbose.ac.in

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Issue

Vol. 93, Iss. 5 — May 2016

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